Table 1 Histone modifications used in our experiments
From: Hi–C interaction graph analysis reveals the impact of histone modifications in chromatin shape
Species & Cell type | Histone modifications |
|---|---|
Human ES | H3K4me1, H3K4me3, H3K9me3, H3K27ac, H3K79me2, H3K36me3, |
H4K20me1, H3K27me3, H3K56ac, H3K23ac, H2AK5ac, H2A.Z, | |
H3K9ac, H3K4me2, H4K8ac, H3K18ac | |
Human IMR90 | H3K4me1, H3K4me3, H3K9me3, H3K27ac, H3K79me2, H3K36me3, |
H4K20me1, H3K27me3, H3K56ac, H3K23ac, H2AK5ac, H2A.Z, | |
H3K9ac, H3K4me2, H4K8ac, H3K18ac | |
Mouse ES | H3K4me3, H3K27ac, H3K36me3, H3K4me1, H3K9me3, H3K27me3, H3K9ac |