From: An end-to-end graph convolutional kernel support vector machine
Model | MUTAG | PTC_MR | BZR_MD | PTC_FM | COX2 |
---|---|---|---|---|---|
Graphlet | 0.86 ±0.05 | 0.54 ±0.08 | 0.61 ±0.12 | 0.57 ±0.07 | 0.75 ±0.06 |
Shortest path | 0.82 ±0.06 | 0.55 ±0.08 | 0.68 ±0.07 | 0.55 ±0.07 | 0.77 ±0.06 |
Vertex histogram | 0.85 ±0.05 | 0.58 ±0.07 | 0.70 ±0.08 | 0.58 ±0.06 | 0.75 ±0.06 |
Weisfeiler Lehman | 0.71 ±0.06 | 0.59 ±0.07 | 0.60 ±0.07 | 0.63 ±0.08 | 0.65 ±0.08 |
Pyramid match | 0.86 ±0.06 | 0.54 ±0.06 | 0.62 ±0.07 | 0.57 ±0.09 | 0.73 ±0.06 |
GCN | 0.73 ±0.06 | 0.57 ±0.03 | 0.68 ±0.06 | 0.61 ±0.08 | 0.79 ±0.03 |
GCNWithJK | 0.73 ±0.07 | 0.57 ±0.05 | 0.68 ±0.07 | 0.62 ±0.08 | 0.78 ±0.02 |
GIN | 0.82 ±0.07 | 0.54 ±0.05 | 0.62 ±0.09 | 0.57 ±0.07 | 0.80 ±0.04 |
GIN0 | 0.85 ±0.04 | 0.57 ±0.08 | 0.63 ±0.13 | 0.59 ±0.05 | 0.77 ±0.04 |
GINWithJK | 0.83 ±0.07 | 0.55 ±0.07 | 0.61 ±0.15 | 0.60 ±0.04 | 0.80 ±0.06 |
GIN0WithJK | 0.83 ±0.06 | 0.54 ±0.07 | 0.63 ±0.10 | 0.59 ±0.06 | 0.82 ±0.05 |
GraphSAGE | 0.72 ±0.06 | 0.57 ±0.08 | 0.68 ±0.09 | 0.61 ±0.06 | 0.78 ±0.01 |
GraphSAGEWithJK | 0.71 ±0.09 | 0.56 ±0.04 | 0.68 ±0.09 | 0.60 ±0.07 | 0.77 ±0.01 |
DiffPool | 0.84 ±0.12 | 0.57 ±0.03 | 0.69 ±0.07 | 0.61 ±0.06 | 0.77 ±0.02 |
GlobalAttentionNet | 0.74 ±0.07 | 0.56 ±0.05 | 0.67 ±0.06 | 0.63 ±0.06 | 0.77 ±0.01 |
Set2SetNet | 0.73 ±0.07 | 0.56 ±0.03 | 0.68 ±0.10 | 0.62 ±0.06 | 0.78 ±0.04 |
SortPool | 0.75 ±0.11 | 0.59 ±0.08 | 0.66 ±0.09 | 0.60 ±0.08 | 0.77 ±0.01 |
Proposed model | 0.87 ±0.06 | 0.60 ±0.08 | 0.62 ±0.10 | 0.62 ±0.06 | 0.79 ±0.05 |