Improved prediction of missing protein interactome links via anomaly detection

Applied Network Science

Table 7 Results for Classifier trained on Arabidopsis thaliana and tested on remaining datasets

Classifier	Networks	Without anomaly detection			With anomaly detection
		Accuracy	F-measure	AUC	Accuracy	F-measure	AUC
SVM	Rattus norvegicus	96.71	96.64	96.71	98.98	98.99	98.98
	Mus-Musculus	93.78	93.68	93.78	95.79	95.96	95.79
	C.elegans	85.03	86.03	85.03	81.63	84.48	81.63
C5.0	Rattus norvegicus	99.46	99.46	99.46	99.45	99.45	99.45
	Mus-Musculus	99.34	99.34	99.34	99.22	99.22	99.22
	C.elegans	96.92	97.00	96.92	95.72	95.89	95.72
KNN	Rattus norvegicus	96.66	96.56	96.67	99.58	99.58	99.58
	Mus-Musculus	95.45	95.31	95.45	98.18	98.20	98.18
	C.elegans	91.38	91.45	91.37	90.52	91.34	90.52
NB	Rattus norvegicus	64.42	44.95	64.42	77.33	71.09	77.33
	Mus-Musculus	60.78	36.47	60.78	76.14	70.10	76.15
	C.elegans	57.96	35.03	57.96	70.69	68.43	70.69