Table 4 Metrics on NETME ’s ability to predict known interactions (from KEGG/Reactome) and non-interactions (from Negatome 2.0) between genes
From: NETME: on-the-fly knowledge network construction from biomedical literature
Text-mining score interval | Accuracy (%) | Sensitivity (%) | Specificity (%) | PPV (%) |
|---|---|---|---|---|
500–600 | 58.5 | 31 | 86 | 68.8 |
600–700 | 66.5 | 47 | 86 | 77.05 |
700–800 | 72.5 | 59 | 86 | 80.8 |
800–900 | 73.5 | 61 | 86 | 81.3 |
\(\ge 900\) | 84 | 82 | 86 | 85.4 |