Table 5 Parameter estimates with 95% confidence interval for the human PPI (HIPPIE high confidence) network, from the EE algorithm
From: Testing biological network motif significance with exponential random graph models
Effect | Model 1 | Model 2 |
|---|---|---|
Edge | \(\mathbf {\underset{(-12.550, -12.450)}{-12.500}}\) | \(\mathbf {\underset{(-12.498, -12.402)}{-12.450}}\) |
AS | \(\mathbf {\underset{(1.222, 1.258)}{1.240}}\) | \(\mathbf {\underset{(1.208, 1.245)}{1.226}}\) |
A2P | \(\mathbf {\underset{(-0.001, -0.001)}{-0.001}}\) | \(\mathbf {\underset{(-0.001, -0.001)}{-0.001}}\) |
AT | \(\mathbf {\underset{(1.692, 1.711)}{1.701}}\) | \(\mathbf {\underset{(1.680, 1.699)}{1.690}}\) |
Match cellular component | – | \(\mathbf {\underset{(0.431, 0.498)}{0.465}}\) |